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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29062468_29062552_F

Intron Information:

Intron Rank:

125821

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29062468 - 29062552

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTACGAGTTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TGTCACATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

57.4

0.17

1.2

53.1

45.1

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

57.2

0.22

1.8

72.46

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023418

29061878 - 29080404

18527