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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29271520_29272894_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29271520 - 29272894

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TAAACTGAAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTAAACT

Flanking Amino Acid:

AEAKFREIAEAYETLSDENK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

49.8

-0

1.1

44.4

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

67.3

0.62

1.6

82.56

39.6

Associated Gene:

Gene:

DNAJB9

Ensembl Gene ID:

ENSAPLG00000022575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017240

29270532 - 29273122

2591