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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29350226_29350663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29350226 - 29350663

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TCTGTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

53.6

0.19

1.7

70.13

42.3

Associated Gene:

Gene:

PNPLA8

Ensembl Gene ID:

ENSAPLG00000017737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036392

29350131 - 29385171

35041