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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29366978_29384355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29366978 - 29384355

Intron Length:

17378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTACTTTTAATT

Flanking Amino Acid:

EYVLGNDLHQDGGLLLNNPS

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.1

0.83

0.8

35.3

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

71.5

0.75

1.1

81.64

33.7

Associated Gene:

Gene:

PNPLA8

Ensembl Gene ID:

ENSAPLG00000017737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036392

29350131 - 29385171

35041