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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29510537_29510849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29510537 - 29510849

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTTGTATAAAG

Flanking Amino Acid:

YFGSPKPEIEWFKGVKGSIL

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

0.75

78.6

Major PPT

70.1

0.45

1.1

38.1

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

49.1

-0.2

2.2

65.4

42.4

Associated Gene:

Gene:

NRCAM

Ensembl Gene ID:

ENSAPLG00000008656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009199

29492458 - 29550623

58166