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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29522208_29523173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29522208 - 29523173

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTAATAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTCTTGTAATA

Flanking Amino Acid:

LISYILKFQPINNTHELGPL

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.2

0.43

63.4

40.9

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

54.9

0.15

71.66

34.9

Associated Gene:

Gene:

NRCAM

Ensembl Gene ID:

ENSAPLG00000008656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009199

29492458 - 29550623

58166