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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29523351_29538040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29523351 - 29538040

Intron Length:

14690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTAAT

U12 Branch Point Sequence:

CATCTCGTAATA

Flanking Amino Acid:

TEEAVTIMDEAMASRQVDIA

Intron Amino Acid Position:

945

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

71.8

0.54

1.2

71.9

Major PPT

82.4

0.73

0.7

81.2

30.9

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

49.2

-0

61.13

39.4

Associated Gene:

Gene:

NRCAM

Ensembl Gene ID:

ENSAPLG00000008656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009199

29492458 - 29550623

58166