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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29654532_29659546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29654532 - 29659546

Intron Length:

5015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCGAA

5'SS Class:

major

3'SS Sequence:

TCTTCAATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CTTTCTTCAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

61.5

39.2

Major BPS

78.2

0.7

79.9

32.6

Major PPT

71.2

0.48

0.8

63.3

37.1

Minor 5ss

34.6

-1.7

3.5

46.8

48.5

Minor BPS

67.1

0.52

1.5

74.09

37.4

Associated Gene:

Gene:

CNTN1

Ensembl Gene ID:

ENSAPLG00000010381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017573

29654385 - 29831590

177206