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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29687428_29741854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29687428 - 29741854

Intron Length:

54427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACGG

5'SS Class:

major

3'SS Sequence:

TCTCTCTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

59.7

45.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.7

0.65

0.8

78.2

Minor 5ss

30.7

-2.2

3.1

39.3

45.9

Minor BPS

57.4

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

CNTN1

Ensembl Gene ID:

ENSAPLG00000010381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010916

29659547 - 29831590

172044