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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29761207_29765270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29761207 - 29765270

Intron Length:

4064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

TGTTTTAAACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTAAACT

Flanking Amino Acid:

RSSEATLSFGYLDPFPPEER

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

67.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.4

0.37

61.2

43.7

Minor 5ss

39.6

-1.2

3.1

44.9

Minor BPS

66.8

0.61

1.6

82.67

39.4

Associated Gene:

Gene:

CNTN1

Ensembl Gene ID:

ENSAPLG00000010381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017573

29654385 - 29831590

177206

ENSAPLT00000010916

29659547 - 29831590

172044

ENSAPLT00000045009

29587053 - 29831590

244538

ENSAPLT00000043731

29584749 - 29831590

246842