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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2976253_2982675_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2976253 - 2982675

Intron Length:

6423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

AACACCACCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTCAG

U12 Branch Point Sequence:

AGCAAGGTAACA

Flanking Amino Acid:

GNGTSPGLSEVFIAVGLTTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

0.05

1.6

63.1

44.4

Major PPT

56.8

0.15

0.9

47.4

34.2

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

37.8

-0.9

2.5

48.09

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029207

2976193 - 2988614

12422