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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29765367_29766336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29765367 - 29766336

Intron Length:

970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

LLCEPPYHYPDDLSYRWLLN

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

77.9

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.4

0.66

0.8

77.7

Minor 5ss

41.4

-1

58.6

45.9

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

CNTN1

Ensembl Gene ID:

ENSAPLG00000010381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043731

29584749 - 29831590

246842

ENSAPLT00000017573

29654385 - 29831590

177206

ENSAPLT00000010916

29659547 - 29831590

172044

ENSAPLT00000045009

29587053 - 29831590

244538