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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29766544_29767777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29766544 - 29767777

Intron Length:

1234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

ATTTTCATGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCTGAGAAT

Flanking Amino Acid:

KFIPLIPQTDRAKVYPADIK

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

83.5

Major BPS

100

1.24

0.5

100

Major PPT

75.6

0.58

39.1

Minor 5ss

43.2

-0.7

2.9

61.1

37.5

Minor BPS

46.7

-0.1

2.4

75.57

41.7

Associated Gene:

Gene:

CNTN1

Ensembl Gene ID:

ENSAPLG00000010381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043731

29584749 - 29831590

246842

ENSAPLT00000017573

29654385 - 29831590

177206

ENSAPLT00000010916

29659547 - 29831590

172044

ENSAPLT00000045009

29587053 - 29831590

244538