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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29817044_29818184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29817044 - 29818184

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGATCT

5'SS Class:

major

3'SS Sequence:

CTGACTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

ATTTCAGTAACT

Flanking Amino Acid:

SNESAVEGYKVLYRPDGQHE

Intron Amino Acid Position:

931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

70.6

Major BPS

75.5

0.63

1.1

34.4

Major PPT

69.2

0.43

0.9

61.4

39.9

Minor 5ss

48.4

-0.1

2.7

66.2

38.8

Minor BPS

62.4

0.47

2.2

87.83

37.1

Associated Gene:

Gene:

CNTN1

Ensembl Gene ID:

ENSAPLG00000010381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017573

29654385 - 29831590

177206

ENSAPLT00000010916

29659547 - 29831590

172044

ENSAPLT00000045009

29587053 - 29831590

244538

ENSAPLT00000043731

29584749 - 29831590

246842