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Intron Name: Anas_platyrhynchos_platyrhynchos_1_2982763_2986045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2982763 - 2986045

Intron Length:

3283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGACCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTCTCTTATCT

Flanking Amino Acid:

VTVHLRYSFKVSKSPSLRVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.3

1.07

0.7

84.4

33.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

74.5

0.55

0.9

63.9

42.4

Minor 5ss

36.9

-1.5

51.2

45.2

Minor BPS

72.3

0.78

1.5

89.15

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029207

2976193 - 2988614

12422