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Intron Name: Anas_platyrhynchos_platyrhynchos_1_29895254_30079647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29895254 - 30079647

Intron Length:

184394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGCATT

5'SS Class:

major

3'SS Sequence:

TGTTTTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTGTGCTTACTC

Flanking Amino Acid:

MEEEQEKVNGKDLSKAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

0.9

80.7

33.7

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

77.1

0.61

75.9

38.3

Minor 5ss

41.6

-0.9

3.1

40.7

Minor BPS

55.4

0.15

2.1

69.56

42.8

Associated Gene:

Gene:

PDZRN4

Ensembl Gene ID:

ENSAPLG00000011265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011727

29884201 - 30122382

238182