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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3000264_3001228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3000264 - 3001228

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

ACATCAAGAATT

Flanking Amino Acid:

FEQHPVQCVSGSAHPSFSSS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.3

39.1

Major BPS

62.4

0.31

32.1

Major PPT

84.7

0.78

0.7

80.7

24.5

Minor 5ss

42.2

-0.9

3.1

54.5

49.7

Minor BPS

45.6

-0.2

1.9

62.77

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004217

2987842 - 3013822

25981

ENSAPLT00000036751

2989750 - 3013822

24073