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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3002196_3002501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3002196 - 3002501

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGATTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATCTGTCTAACT

Flanking Amino Acid:

PAPPKQENLSGFCGTPKTVP

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

74.4

0.55

65.4

45.2

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

51.9

0.14

2.1

74.59

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036751

2989750 - 3013822

24073

ENSAPLT00000004217

2987842 - 3013822

25981

ENSAPLT00000004216

2999152 - 3013822

14671