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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30306450_30312329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30306450 - 30312329

Intron Length:

5880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

GTTATCTTAAAT

Flanking Amino Acid:

MTRIRRKYFKNDMTTVRLQW

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

77.8

0.69

78.2

31.8

Major PPT

76.5

0.6

0.9

73.3

35.9

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

70.2

0.71

1.4

82.85

37.6

Associated Gene:

Gene:

GXYLT1

Ensembl Gene ID:

ENSAPLG00000004547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004690

30302187 - 30332549

30363