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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30352009_30374735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30352009 - 30374735

Intron Length:

22727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TATGTGCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTATGTTTATAT

Flanking Amino Acid:

MCDVRKGTSTRKPRPVSQLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

65.2

0.34

58.1

42.1

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

49.7

0.06

2.1

73.8

43.1

Associated Gene:

Gene:

YAF2

Ensembl Gene ID:

ENSAPLG00000023613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044669

30348601 - 30375111

26511