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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30429569_30430398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30429569 - 30430398

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTATGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAC

U12 Branch Point Sequence:

TACGCTTCAAAC

Flanking Amino Acid:

EVAHHTEVYIRMNQDTDGQG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.8

35.1

Major BPS

67.4

0.43

73.2

28.9

Major PPT

76.6

0.6

69.5

41.4

Minor 5ss

34.8

-1.7

3.1

50.1

46.1

Minor BPS

48.4

-0.1

1.7

56.77

41.8

Associated Gene:

Gene:

PPHLN1

Ensembl Gene ID:

ENSAPLG00000003974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004083

30419180 - 30489307

70128