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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30430461_30449846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30430461 - 30449846

Intron Length:

19386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

GTTGTCTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGTCTTCAAAG

Flanking Amino Acid:

IIL*VGSLNTGMSETASEEK

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

67.1

0.38

1.1

66.9

38.5

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

58.2

0.12

1.7

64.83

Associated Gene:

Gene:

PPHLN1

Ensembl Gene ID:

ENSAPLG00000003974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004083

30419180 - 30489307

70128