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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3048279_3048758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3048279 - 3048758

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATGTTCTAATC

Flanking Amino Acid:

GKVGKCVIFEIPGAPDDEAV

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

50.4

-0

1.7

63.21

36.8

Associated Gene:

Gene:

RBM17

Ensembl Gene ID:

ENSAPLG00000004190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004309

3036251 - 3049170

12920