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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30780873_30781547_R


Intron Information:

Intron Rank:
38

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
30780873 - 30781547

Intron Length:
675

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTAAGTCAA

5'SS Class:
major

3'SS Sequence:
GTCTCATTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTGAT

U12 Branch Point Sequence:
CTTCTCTTGATT

Flanking Amino Acid:
YATADIHKSHDGTKIYGRCG

Intron Amino Acid Position:
1884

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1.3
74.1
38.3

Major BPS
83.8
0.84
1
73.6
41.8

Major PPT
78.8
0.65
0.9
69.5
40.7

Minor 5ss
34.9
-1.7
2.9
40.4
38.9

Minor BPS
68.6
0.67
1.2
79.75
36.6

Associated Gene:

Gene:
ADAMTS20

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30780783 - 30873586
92804

30780783 - 30873871
93089