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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30785081_30785168_R


Intron Information:

Intron Rank:
34

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
30785081 - 30785168

Intron Length:
88

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTCTTA

5'SS Class:
major

3'SS Sequence:
TTTTCTCTGGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTGCTAAAGG

Flanking Amino Acid:
LLNIKGRMIKIYCSGMHLEN

Intron Amino Acid Position:
1742

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.5
0.51
1.1
68
39.7

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
83.3
0.75
0.9
81.1
30.9

Minor 5ss
46.4
-0.4
3.1
65
46.2

Minor BPS
49.4
-0.1
2.4
66.67
47.1

Associated Gene:

Gene:
ADAMTS20

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30780783 - 30873586
92804

30780783 - 30873871
93089