Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_30785547_30785679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30785547 - 30785679

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TATCCATGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ACCTTCTAAACT

Flanking Amino Acid:

ATWRVGKWTKCSVTCGVGVK

Intron Amino Acid Position:

1667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.2

0.39

41.7

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

61.3

0.43

1.7

73.16

44.2

Associated Gene:

Gene:

ADAMTS20

Ensembl Gene ID:

ENSAPLG00000003314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038569

30780783 - 30873586

92804

ENSAPLT00000003449

30780783 - 30873871

93089