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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30813783_30814096_R


Intron Information:

Intron Rank:
26

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
30813783 - 30814096

Intron Length:
314

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGAATT

5'SS Class:
major

3'SS Sequence:
CATGTTTTGGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
ATATCTTTACAT

Flanking Amino Acid:
YQWRTGPWGACSSTCAGGFH

Intron Amino Acid Position:
1316

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1
78.7
35.4

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
68.4
0.42
1
65.5
40.7

Minor 5ss
41.6
-0.9
3.2
64.3
40.6

Minor BPS
60.3
0.4
1.7
76.48
39.9

Associated Gene:

Gene:
ADAMTS20

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30780783 - 30873586
92804

30780783 - 30873871
93089