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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30817507_30819305_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
30817507 - 30819305

Intron Length:
1799

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTGAGTACA

5'SS Class:
major

3'SS Sequence:
AAATTATTAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAA

U12 Branch Point Sequence:
AAATTATTAACA

Flanking Amino Acid:
ASWQVGPWGSCTVTCGRGYQ

Intron Amino Acid Position:
1087

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1
70.8
34.6

Major BPS
82
0.79
0.8
83.7
25.7

Major PPT
65.9
0.36
1.1
59.8
44.2

Minor 5ss
32.8
-2
2.7
40.4
39.1

Minor BPS
63
0.4
1.5
69.22
36.1

Associated Gene:

Gene:
ADAMTS20

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30780783 - 30873586
92804

30780783 - 30873871
93089