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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30821032_30821703_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
30821032 - 30821703

Intron Length:
672

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAAAAGA

5'SS Class:
major

3'SS Sequence:
TTTATCTTTGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
CTTTCTATAACA

Flanking Amino Acid:
SEECNTECELRWHSIGKSDC

Intron Amino Acid Position:
906

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.7
0.65
0.9
70.2
35.7

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
85.6
0.8
0.7
81.5
30.3

Minor 5ss
26.7
-2.7
2.8
31.6
42.2

Minor BPS
70.3
0.63
1.6
80.03
36.1

Associated Gene:

Gene:
ADAMTS20

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30780783 - 30873586
92804

30780783 - 30873871
93089