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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30839724_30840348_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
30839724 - 30840348

Intron Length:
625

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTAAGTACC

5'SS Class:
major

3'SS Sequence:
GTTTGTACAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTAAAT

U12 Branch Point Sequence:
GAATGATTAAAT

Flanking Amino Acid:
CSQKYITEFLDTGYGECLLD

Intron Amino Acid Position:
456

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1
72.6
37.3

Major BPS
73.5
0.58
1
79.3
29.4

Major PPT
69.2
0.43
1
63.5
41.8

Minor 5ss
38.3
-1.3
2.7
43.9
37

Minor BPS
47.8
-0
2.1
66
43.4

Associated Gene:

Gene:
ADAMTS20

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30780783 - 30873586
92804

30780783 - 30873871
93089