Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_30841629_30841952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30841629 - 30841952

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCGATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTATATAACA

Flanking Amino Acid:

CRAREKCDTLGLAELGTMCD

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.7

89.2

17.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

82.2

0.73

0.9

76.5

37.3

Minor 5ss

36.4

-1.5

2.9

48.7

47.5

Minor BPS

65.4

0.48

1.8

81.46

33.3

Associated Gene:

Gene:

ADAMTS20

Ensembl Gene ID:

ENSAPLG00000003314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038569

30780783 - 30873586

92804

ENSAPLT00000003449

30780783 - 30873871

93089