Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_30843791_30853825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30843791 - 30853825

Intron Length:

10035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATATTCTGATCT

Flanking Amino Acid:

QHYILTLMSIVAAIYKDSSI

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.7

29.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.74

0.6

81.6

23.4

Minor 5ss

36.9

-1.5

2.7

38.6

Minor BPS

57.7

0.32

1.7

76.08

40.2

Associated Gene:

Gene:

ADAMTS20

Ensembl Gene ID:

ENSAPLG00000003314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038569

30780783 - 30873586

92804

ENSAPLT00000003449

30780783 - 30873871

93089