Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_30932173_30933634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30932173 - 30933634

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTTTCA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGTTTTTTAAAG

Flanking Amino Acid:

IGLALLNGKMVEAVKLFFTP

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

64.9

35.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.3

0.68

82.2

33.3

Minor 5ss

46.8

-0.3

2.4

56.6

42.8

Minor BPS

66.7

0.39

1.4

68.86

38.5

Associated Gene:

Gene:

PUS7L

Ensembl Gene ID:

ENSAPLG00000012601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013138

30927748 - 30938671

10924