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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30940133_30940689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30940133 - 30940689

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

ATATCTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCTGTGTTAAAT

Flanking Amino Acid:

ENNSSQSSNTDFHNFWFRDL

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

70.4

38.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

77.1

0.61

0.8

74.7

35.3

Minor 5ss

33.5

-1.9

3.5

41.3

45.2

Minor BPS

49.5

0.04

2.2

72.05

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030157

30938058 - 30952031

13974

ENSAPLT00000012774

30938766 - 30945620

6855

ENSAPLT00000032253

30938766 - 30952031

13266