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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30940851_30942062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30940851 - 30942062

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTTAT

5'SS Class:

major

3'SS Sequence:

ACTTTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATGTAAAAT

Flanking Amino Acid:

RNVAVKKLAAMVDISAQDLK

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

73.4

33.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

82.2

0.72

0.7

77.5

30.4

Minor 5ss

39.3

-1.2

3.1

45.5

Minor BPS

44.1

-0.3

2.3

66.29

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032253

30938766 - 30952031

13266

ENSAPLT00000030157

30938058 - 30952031

13974

ENSAPLT00000012774

30938766 - 30945620

6855