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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30992933_30994689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30992933 - 30994689

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTACATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

GTATCTCTACAT

Flanking Amino Acid:

AGTQPRRAAARQRTALNYLR

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

81.7

31.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.58

0.9

69.8

34.7

Minor 5ss

35.3

-1.7

2.9

46.6

41.8

Minor BPS

47.2

-0.1

67.73

42.6

Associated Gene:

Gene:

TMEM117

Ensembl Gene ID:

ENSAPLG00000011678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026139

30992385 - 31203516

211132

ENSAPLT00000012151

30992385 - 31203516

211132