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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30994860_30994952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30994860 - 30994952

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACTGCT

5'SS Class:

major

3'SS Sequence:

GCCATTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

CCATTCTCACAG

Flanking Amino Acid:

SQTEANVIVVGLIAGKFLFH

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

70.1

40.6

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

70.9

0.47

0.9

63.9

36.8

Minor 5ss

41.4

-1

3.2

59.9

44.5

Minor BPS

-0.7

1.9

40.81

43.5

Associated Gene:

Gene:

TMEM117

Ensembl Gene ID:

ENSAPLG00000011678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030170

30993833 - 31203469

209637

ENSAPLT00000026139

30992385 - 31203516

211132