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Intron Name: Anas_platyrhynchos_platyrhynchos_1_30994995_31024743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30994995 - 31024743

Intron Length:

29749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATTCATACGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTCTTGTAATA

Flanking Amino Acid:

GKFLFHQRLFGQLLRLKMFR

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

64.6

0.33

1.1

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

54.9

0.15

71.66

34.9

Associated Gene:

Gene:

TMEM117

Ensembl Gene ID:

ENSAPLG00000011678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012151

30992385 - 31203516

211132

ENSAPLT00000030170

30993833 - 31203469

209637

ENSAPLT00000026139

30992385 - 31203516

211132