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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31193525_31202828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31193525 - 31202828

Intron Length:

9304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCCAAACA

Flanking Amino Acid:

FKEEYHIHITGKWFNYGIIF

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.3

0.55

0.9

70.6

33.9

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

54.4

0.13

71.21

41.3

Associated Gene:

Gene:

TMEM117

Ensembl Gene ID:

ENSAPLG00000011678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030170

30993833 - 31203469

209637

ENSAPLT00000026139

30992385 - 31203516

211132

ENSAPLT00000012151

30992385 - 31203516

211132