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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31440520_31452493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31440520 - 31452493

Intron Length:

11974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

GGATAATCAATT

Flanking Amino Acid:

RGGVFPPAATALSKHFFLRA

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

71.2

0.53

72.3

32.8

Major PPT

0.74

0.8

77.1

31.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

45.7

-0.2

1.9

61.73

41.3

Associated Gene:

Gene:

DBX2

Ensembl Gene ID:

ENSAPLG00000011161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011609

31433133 - 31453406

20274