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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_31561828_31562805_F

Intron Information:

Intron Rank:
18
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
31561828 - 31562805
Intron Length:
978

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAAGCGTG
5'SS Class:
strong_major
3'SS Sequence:
TCACCTTCCCTAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TTTTTTTTCATT
Flanking Amino Acid:
AKLAFIIVMEHVIYFVKFII
Intron Amino Acid Position:
759

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
89.2
0.92
0.9
76.2
39.9
Major BPS
100
1.24
0.5
100
0
Major PPT
69.1
0.43
0.8
61.8
34.6
Minor 5ss
39.9
-1.1
3.4
55
49.2
Minor BPS
67.5
0.63
1.7
86.64
33.8

Associated Gene:

Gene:
ANO6
Ensembl Gene ID:
ENSAPLG00000010899
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000018682
31521311 - 31563381
42071