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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31723543_31723920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31723543 - 31723920

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTAATACTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTGCGTTTAATA

Flanking Amino Acid:

TKISKVEKSIDTLVCLVSMD

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

74.5

0.55

0.9

71.7

38.8

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

57.9

0.24

1.8

68.12

39.1

Associated Gene:

Gene:

ARID2

Ensembl Gene ID:

ENSAPLG00000010567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011043

31652986 - 31753795

100810