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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31765206_31765594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31765206 - 31765594

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTTTTTCATC

Flanking Amino Acid:

ATADSSKKDQKLLIQEKAAQ

Intron Amino Acid Position:

1314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.6

1.12

0.8

80.1

34.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

88.8

0.87

0.7

90.1

24.5

Minor 5ss

30.2

-2.3

3.8

41.6

Minor BPS

64.3

0.43

1.7

33.7

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030720

31763980 - 31794483

30504

ENSAPLT00000010922

31764605 - 31808029

43425