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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31765814_31768087_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31765814 - 31768087

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

CTTTTTAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTATTTTAACT

Flanking Amino Acid:

ASQQDGKQLQGMQNAAHVSN

Intron Amino Acid Position:

1241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.1

0.54

37.6

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

74.3

0.84

1.2

85.02

35.1

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030720

31763980 - 31794483

30504

ENSAPLT00000010922

31764605 - 31808029

43425