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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31772688_31776706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31772688 - 31776706

Intron Length:

4019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAACTTT

5'SS Class:

major

3'SS Sequence:

GCTTTATCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAAACTTTAATG

Flanking Amino Acid:

PANIRPLENFGKGYAVACTQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

73.9

37.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

76.9

0.61

0.8

74.4

35.4

Minor 5ss

49.3

-0

69.9

42.9

Minor BPS

64.1

0.3

1.4

62.24

39.7

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030720

31763980 - 31794483

30504

ENSAPLT00000010922

31764605 - 31808029

43425