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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31779155_31781583_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31779155 - 31781583

Intron Length:

2429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

TTTCTAATTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTTTCTAATT

Flanking Amino Acid:

RKALSVKINKPRRKTCWNEC

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

38.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.67

0.8

75.2

33.4

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

0.33

1.6

74.11

37.4

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030720

31763980 - 31794483

30504

ENSAPLT00000010922

31764605 - 31808029

43425