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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31783449_31785133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31783449 - 31785133

Intron Length:

1685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCAATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATTTTTCAATT

Flanking Amino Acid:

RLNALEDQIKVQVKQQQRKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.3

0.77

0.8

32.3

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

66.4

0.59

1.4

80.75

35.2

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030720

31763980 - 31794483

30504

ENSAPLT00000010922

31764605 - 31808029

43425