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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31785212_31793370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31785212 - 31793370

Intron Length:

8159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

AATCATTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTACTATAAAT

Flanking Amino Acid:

CMTCILKWAETQASCPIDRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.8

0.63

0.9

73.8

40.4

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

61.8

0.45

1.7

83.29

37.1

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030720

31763980 - 31794483

30504

ENSAPLT00000010922

31764605 - 31808029

43425