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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31794451_31807663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

31794451 - 31807663

Intron Length:

13213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCGT

5'SS Class:

major

3'SS Sequence:

CTATGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TATAAATGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

81.3

0.7

0.9

72.8

42.1

Minor 5ss

39.2

-1.2

3.1

48.4

47.2

Minor BPS

49.7

0.05

1.9

74.09

41.3

Associated Gene:

Gene:

SCAF11

Ensembl Gene ID:

ENSAPLG00000010483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010922

31764605 - 31808029

43425