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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3182953_3183786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3182953 - 3183786

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

CTTTTCTTGAAG

Flanking Amino Acid:

RIEPPFKPRVKSPSDCSNFD

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

77.3

0.61

78.7

27.4

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

63.4

0.28

1.5

66.96

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932